PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN25765.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 239aa    MW: 26715.5 Da    PI: 7.5036
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN25765.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.2e-0581135554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.as....kapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRd++N++ + +  ++   +s     ++++K +K++ L  A + + +L
  KHN25765.1  81 KACREKLRRDKLNERHAIILHIVFLeLSsilePGRQPKTDKVALLSDAARVVIQL 135
                 678*************999999999777999999*************99887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.05176135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.75E-480140No hitNo description
SuperFamilySSF474596.38E-882158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-884157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDMNSSGGAC GWLYDYGFDI PVAGSDFMAS DSGGFSWGPQ SYNFKGPSNM SLEMEYSLDS  60
TVMENGPSKR LRTESCASGS KACREKLRRD KLNERHAIIL HIVFLELSSI LEPGRQPKTD  120
KVALLSDAAR VVIQLRNEAE RLKEMNDELQ AKVKELKGEK NELRDEKNRL KEEKEKLEKQ  180
VKLTNIQPSF LPQAPDAKGQ VGSHKLIPFI GYPGIAMWQF MSPAAVDTSK DHLLRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0971260.0BT097126.1 Soybean clone JCVI-FLGm-15N2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543375.11e-160PREDICTED: transcription factor bHLH115-like
RefseqXP_006594876.11e-160PREDICTED: transcription factor bHLH115-like
SwissprotQ9C6822e-68BH115_ARATH; Transcription factor bHLH115
SwissprotQ9FH372e-68ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0B2QW231e-179A0A0B2QW23_GLYSO; Transcription factor ILR3
STRINGGLYMA13G38140.11e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149161214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51070.12e-56bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]